miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2217	+	350	90	22	-25.5			5' arm      3' arm
2218	+	2107	90	19.5	-24.5	NP_040510		5' arm      3' arm
2219	+	4516	90	25	-29.6	NP_040515		5' arm      3' arm
2220	+	4617	83	19.5	-20.7	NP_040515		5' arm      3' arm
2221	+	4887	89	21.5	-22	NP_040515		5' arm      3' arm
2222	+	5292	88	25.5	-25.9	NP_040516		5' arm      3' arm
2223	+	5467	89	19.5	-20.1	NP_040516		5' arm      3' arm
2224	+	5987	88	23	-25.5	NP_040516		5' arm      3' arm
2225	+	6445	87	20	-20.2	NP_040516		5' arm      3' arm
2226	+	6597	86	22.5	-28.2	NP_040516		5' arm      3' arm
2227	+	7591	85	20.5	-23.5	NP_040516		5' arm      3' arm
2228	+	8334	90	20	-28.2	NP_040517		5' arm      3' arm
2229	+	8658	90	21.5	-19.8	NP_040518		5' arm      3' arm
2230	+	10069	75	21	-27.3	NP_040518		5' arm      3' arm
2231	+	10422	90	21	-24	NP_040518		5' arm      3' arm
2232	+	10629	89	20.5	-36.3			5' arm      3' arm
2233	+	10783	90	23	-23.8	NP_597752		5' arm      3' arm
2234	+	13269	88	19.5	-22.5	NP_040520		5' arm      3' arm
2235	+	16312	88	23	-23.9	NP_040522		5' arm      3' arm
2236	+	17120	86	20	-20.7	NP_040523		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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