miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8371	-	17698	88	21.5	-29.7	NP_049380		5' arm      3' arm
8384	-	32933	87	21.5	-26.3	NP_597880		5' arm      3' arm
8363	-	12976	90	21.5	-23.2	NP_049378		5' arm      3' arm
8357	-	11009	90	21	-22	NP_049377		5' arm      3' arm
8344	+	23390	90	21	-22.2	NP_597871		5' arm      3' arm
8356	-	10866	88	21	-25	NP_049377		5' arm      3' arm
8341	+	22054	88	21	-22.7	NP_597870		5' arm      3' arm
8370	-	17595	81	21	-23.1	NP_049380		5' arm      3' arm
8338	+	17413	90	21	-27	NP_049380		5' arm      3' arm
8359	-	11877	90	21	-27.9	NP_049378		5' arm      3' arm
8331	+	10920	90	21	-27.3	NP_049377		5' arm      3' arm
8325	+	5232	88	20.5	-30.1	NP_049375		5' arm      3' arm
8381	-	25751	87	20.5	-24.2	NP_597872		5' arm      3' arm
8379	-	25462	90	20.5	-23.5			5' arm      3' arm
8332	+	11922	85	20.5	-21.06	NP_049378		5' arm      3' arm
8373	-	20179	89	20.5	-21.84	NP_597869		5' arm      3' arm
8323	+	4646	82	20.5	-21.6	NP_597866		5' arm      3' arm
8369	-	16819	89	20.5	-22.4	NP_597868		5' arm      3' arm
8350	-	3118	89	20	-22.7	NP_597865		5' arm      3' arm
8347	+	29510	88	20	-24	NP_597876		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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