miRNA display CGI


Results 1 - 20 of 90 are showing below:
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GenBank Identifier RefSeq Acc. Name
15320794 NC_003084.1 Culex nigripalpus baculovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11357 + 104674 84 22.5 -22.5 NP_203412 5' arm      3' arm
11356 + 103712 89 21.5 -22.3 NP_203410 5' arm      3' arm
11402 - 103073 90 19.5 -19.8 NP_203408 5' arm      3' arm
11401 - 102806 90 20 -21.4 NP_203408 5' arm      3' arm
11355 + 100609 90 21.5 -20.8 NP_203407 5' arm      3' arm
11400 - 100379 87 22 -20.2 NP_203407 5' arm      3' arm
11353 + 97691 88 21.5 -27.1 NP_203403 5' arm      3' arm
11354 + 97847 90 22 -22.1 NP_203403 5' arm      3' arm
11399 - 96615 88 20.5 -23.1 NP_203402 5' arm      3' arm
11352 + 94370 89 23 -24.4 NP_203400 5' arm      3' arm
11398 - 93872 87 19.5 -23.4 NP_203399 5' arm      3' arm
11351 + 91955 87 20 -24.9 NP_203397 5' arm      3' arm
11350 + 91153 90 21 -32.1 NP_203396 5' arm      3' arm
11397 - 88748 90 21 -19.5 NP_203396 5' arm      3' arm
11395 - 83178 82 20.5 -22.6 NP_203395 5' arm      3' arm
11396 - 86084 85 21.5 -19.42 NP_203395 5' arm      3' arm
11347 + 81478 87 21 -23.8 NP_203394 5' arm      3' arm
11348 + 81732 90 22.5 -26 NP_203394 5' arm      3' arm
11394 - 81924 89 22.5 -25.7 NP_203394 5' arm      3' arm
11393 - 80912 88 23.5 -22 NP_203394 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.