miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11333	+	47246	90	20.5	-20.7	NP_203363		5' arm      3' arm
11334	+	49107	90	20	-21.5			5' arm      3' arm
11335	+	49199	89	28.5	-35.6			5' arm      3' arm
11336	+	49369	89	25.5	-32.9			5' arm      3' arm
11337	+	49582	89	22	-23.7			5' arm      3' arm
11338	+	53007	86	21	-25.3			5' arm      3' arm
11339	+	54692	88	20.5	-25.2	NP_203370		5' arm      3' arm
11340	+	63068	90	19	-25.9	NP_203376		5' arm      3' arm
11341	+	64337	89	19	-21.7	NP_203377		5' arm      3' arm
11342	+	67656	87	21	-27.61	NP_203380		5' arm      3' arm
11343	+	70035	90	19.5	-19.5	NP_203384		5' arm      3' arm
11344	+	73191	90	23	-24.8	NP_203389		5' arm      3' arm
11345	+	73492	87	21.5	-19.6	NP_203389		5' arm      3' arm
11346	+	76981	89	19.5	-22.5	NP_203391		5' arm      3' arm
11347	+	81478	87	21	-23.8	NP_203394		5' arm      3' arm
11348	+	81732	90	22.5	-26	NP_203394		5' arm      3' arm
11349	+	81836	89	20	-20.2	NP_203394		5' arm      3' arm
11350	+	91153	90	21	-32.1	NP_203396		5' arm      3' arm
11351	+	91955	87	20	-24.9	NP_203397		5' arm      3' arm
11352	+	94370	89	23	-24.4	NP_203400		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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