miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11390	-	75333	80	22.5	-25.7	NP_203389		5' arm      3' arm
11372	-	49411	81	22	-25.6			5' arm      3' arm
11371	-	49241	81	22	-25.6			5' arm      3' arm
11384	-	65822	90	20	-25.5	NP_203378		5' arm      3' arm
11323	+	33100	90	21	-25.4	NP_203342		5' arm      3' arm
11338	+	53007	86	21	-25.3			5' arm      3' arm
11339	+	54692	88	20.5	-25.2	NP_203370		5' arm      3' arm
11351	+	91955	87	20	-24.9	NP_203397		5' arm      3' arm
11388	-	69750	90	19.5	-24.8	NP_203384		5' arm      3' arm
11322	+	28392	89	21	-24.8	NP_203336		5' arm      3' arm
11344	+	73191	90	23	-24.8	NP_203389		5' arm      3' arm
11389	-	70709	90	21.5	-24.62	NP_203384		5' arm      3' arm
11352	+	94370	89	23	-24.4	NP_203400		5' arm      3' arm
11330	+	42125	89	21.5	-24.1	NP_203357		5' arm      3' arm
11313	+	6875	85	20.5	-24.1	NP_203309		5' arm      3' arm
11347	+	81478	87	21	-23.8	NP_203394		5' arm      3' arm
11391	-	76175	90	20	-23.8	NP_203390		5' arm      3' arm
11319	+	24356	90	20	-23.7	NP_203332		5' arm      3' arm
11376	-	55081	88	19.5	-23.7			5' arm      3' arm
11337	+	49582	89	22	-23.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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