miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11314	+	7466	89	25	-21.8	NP_203311		5' arm      3' arm
11361	-	10419	88	21	-19.6	NP_203315		5' arm      3' arm
11362	-	12339	87	21.5	-22.4	NP_203317		5' arm      3' arm
11363	-	13682	90	19.5	-20.3	NP_203319		5' arm      3' arm
11364	-	13839	90	21	-22.1	NP_203319		5' arm      3' arm
11316	+	14551	90	19.5	-23.2	NP_203321		5' arm      3' arm
11365	-	15832	90	21.5	-21.9	NP_203322		5' arm      3' arm
11366	-	17675	90	24	-27.6	NP_203326		5' arm      3' arm
11317	+	17507	72	19	-27.6	NP_203326		5' arm      3' arm
11318	+	21596	87	21	-20.8	NP_203330		5' arm      3' arm
11319	+	24356	90	20	-23.7	NP_203332		5' arm      3' arm
11321	+	25980	87	23	-20.4	NP_203333		5' arm      3' arm
11320	+	25736	90	20	-21.7	NP_203333		5' arm      3' arm
11322	+	28392	89	21	-24.8	NP_203336		5' arm      3' arm
11367	-	32018	87	19	-21.4	NP_203339		5' arm      3' arm
11323	+	33100	90	21	-25.4	NP_203342		5' arm      3' arm
11324	+	37631	87	19.5	-19.4	NP_203348		5' arm      3' arm
11326	+	39653	85	19.5	-28.3	NP_203351		5' arm      3' arm
11327	+	40575	90	21.5	-21.8	NP_203354		5' arm      3' arm
11328	+	40887	90	20	-26	NP_203355		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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