miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13250	-	113265	90	22.5	-23.9			5' arm      3' arm
13256	-	114590	88	26	-22.2			5' arm      3' arm
13262	-	117813	85	22	-20.86			5' arm      3' arm
13268	-	122600	86	20.5	-26.4			5' arm      3' arm
13241	-	105460	90	21.5	-20.5	NP_570812		5' arm      3' arm
13243	-	106911	89	21	-26.5	NP_570812		5' arm      3' arm
13257	-	114772	89	27	-28.7			5' arm      3' arm
13269	-	123395	90	22.5	-19.7	NP_570821		5' arm      3' arm
13246	-	107779	83	21	-28.7	NP_570813		5' arm      3' arm
13270	-	125718	88	20.5	-27.4	NP_570823		5' arm      3' arm
13252	-	113572	88	26.5	-30.3	NP_598364		5' arm      3' arm
13248	-	111524	89	20.5	-29.02	NP_570816		5' arm      3' arm
13253	-	113748	87	29	-24.9			5' arm      3' arm
13263	-	118317	89	21	-33.1			5' arm      3' arm
13260	-	116885	89	23	-30.4			5' arm      3' arm
13261	-	117067	90	28.5	-26.5			5' arm      3' arm
13232	-	94533	84	23	-26.2	NP_570809		5' arm      3' arm
13242	-	106014	84	21	-22.7	NP_570812		5' arm      3' arm
13240	-	105152	89	24	-22.1	NP_570812		5' arm      3' arm
13247	-	109179	89	20.5	-26.2	NP_570814		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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