miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13215	-	43248	88	19	-28.9	NP_570765		5' arm      3' arm
13206	-	20942	88	20.5	-28.8	NP_570754		5' arm      3' arm
13246	-	107779	83	21	-28.7	NP_570813		5' arm      3' arm
13257	-	114772	89	27	-28.7			5' arm      3' arm
13108	+	20857	88	20	-28.6	NP_570754		5' arm      3' arm
13255	-	114339	88	24.5	-28.6			5' arm      3' arm
13230	-	89000	90	19	-28.5	NP_570804		5' arm      3' arm
13139	+	88912	88	19.5	-28.25	NP_570804		5' arm      3' arm
13102	+	14206	86	24	-28	NP_570750		5' arm      3' arm
13183	-	11639	90	21	-27.9	NP_570749		5' arm      3' arm
13171	+	128482	88	20	-27.7	NP_570823		5' arm      3' arm
13179	-	6904	88	22.5	-27.7	NP_570747		5' arm      3' arm
13092	+	120	89	24	-27.6			5' arm      3' arm
13173	+	132988	89	24	-27.6			5' arm      3' arm
13226	-	77721	88	21	-27.5	NP_570797		5' arm      3' arm
13270	-	125718	88	20.5	-27.4	NP_570823		5' arm      3' arm
13145	+	113064	89	22	-27.3			5' arm      3' arm
13216	-	44807	90	23.5	-27.14	NP_570767		5' arm      3' arm
13138	+	85376	87	19	-26.9	NP_570802		5' arm      3' arm
13229	-	85824	88	20.5	-26.9	NP_570802		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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