miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13091	+	13	86	20.5	-20.2			5' arm      3' arm
13172	+	132881	86	20.5	-20.2			5' arm      3' arm
13118	+	29113	89	22.5	-20.3	NP_570758		5' arm      3' arm
13231	-	89746	90	22	-20.3	NP_570805		5' arm      3' arm
13197	-	17307	89	20	-20.3			5' arm      3' arm
13133	+	64590	88	21.5	-20.32	NP_570787		5' arm      3' arm
13159	+	120801	83	19.5	-20.4			5' arm      3' arm
13241	-	105460	90	21.5	-20.5	NP_570812		5' arm      3' arm
13111	+	26669	89	23	-20.6			5' arm      3' arm
13209	-	30638	90	21	-20.7	NP_570759		5' arm      3' arm
13236	-	102141	88	24.5	-20.7	NP_570812		5' arm      3' arm
13202	-	19255	89	27	-20.7	NP_570752		5' arm      3' arm
13271	-	126384	87	20.5	-20.7	NP_570823		5' arm      3' arm
13175	+	133215	90	21.5	-20.8			5' arm      3' arm
13094	+	367	90	21.5	-20.8			5' arm      3' arm
13262	-	117813	85	22	-20.86			5' arm      3' arm
13142	+	93464	90	20	-20.9	NP_570808		5' arm      3' arm
13233	-	95642	90	22	-20.9	NP_570809		5' arm      3' arm
13162	+	121506	87	22.5	-20.9	NP_570820		5' arm      3' arm
13134	+	69356	90	21	-20.9	NP_570791		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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