miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13229	-	85824	88	20.5	-26.9	NP_570802		5' arm      3' arm
13141	+	93077	90	19.5	-26.8	NP_570808		5' arm      3' arm
13228	-	85463	89	21	-26.71	NP_570802		5' arm      3' arm
13214	-	42072	90	19	-26.6	NP_570765		5' arm      3' arm
13151	+	116615	90	20.5	-26.6			5' arm      3' arm
13261	-	117067	90	28.5	-26.5			5' arm      3' arm
13243	-	106911	89	21	-26.5	NP_570812		5' arm      3' arm
13201	-	18861	89	20	-26.5			5' arm      3' arm
13163	+	124418	90	21.5	-26.42	NP_570822		5' arm      3' arm
13268	-	122600	86	20.5	-26.4			5' arm      3' arm
13232	-	94533	84	23	-26.2	NP_570809		5' arm      3' arm
13120	+	30550	87	23	-26.2	NP_570759		5' arm      3' arm
13247	-	109179	89	20.5	-26.2	NP_570814		5' arm      3' arm
13107	+	18773	89	23.5	-26.2	NP_570752		5' arm      3' arm
13096	+	624	89	25.5	-26			5' arm      3' arm
13177	+	133472	89	25.5	-26			5' arm      3' arm
13195	-	16232	89	21.5	-25.7	NP_570750		5' arm      3' arm
13181	-	9414	89	22	-25.5	NP_570747		5' arm      3' arm
13127	+	49732	90	21	-25.2	NP_570773		5' arm      3' arm
13093	+	209	90	21	-25.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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