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| GenBank Identifier | RefSeq Acc. | Name |
| 18653809 | NC_003401.1 | Cercopithecine herpesvirus 17 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 13091 | + | 13 | 86 | 20.5 | -20.2 | 5' arm 3' arm | |||
| 13093 | + | 209 | 90 | 21 | -25.2 | 5' arm 3' arm | |||
| 13094 | + | 367 | 90 | 21.5 | -20.8 | 5' arm 3' arm | |||
| 13092 | + | 120 | 89 | 24 | -27.6 | 5' arm 3' arm | |||
| 13096 | + | 624 | 89 | 25.5 | -26 | 5' arm 3' arm | |||
| 13104 | + | 15017 | 90 | 19 | -30.6 | NP_570750 | 5' arm 3' arm | ||
| 13106 | + | 18320 | 86 | 19 | -23.2 | NP_570751 | 5' arm 3' arm | ||
| 13115 | + | 28021 | 90 | 20.5 | -19.9 | NP_570757 | 5' arm 3' arm | ||
| 13119 | + | 29954 | 83 | 21.5 | -23.9 | NP_570759 | 5' arm 3' arm | ||
| 13118 | + | 29113 | 89 | 22.5 | -20.3 | NP_570758 | 5' arm 3' arm | ||
| 13114 | + | 27852 | 89 | 22.5 | -21.7 | NP_570757 | 5' arm 3' arm | ||
| 13120 | + | 30550 | 87 | 23 | -26.2 | NP_570759 | 5' arm 3' arm | ||
| 13121 | + | 31193 | 89 | 23.5 | -24.3 | NP_570760 | 5' arm 3' arm | ||
| 13113 | + | 27303 | 90 | 20 | -23.5 | NP_570756 | 5' arm 3' arm | ||
| 13110 | + | 23541 | 90 | 21 | -21.9 | NP_598359 | 5' arm 3' arm | ||
| 13112 | + | 27160 | 89 | 22.5 | -21.2 | NP_570756 | 5' arm 3' arm | ||
| 13111 | + | 26669 | 89 | 23 | -20.6 | 5' arm 3' arm | |||
| 13108 | + | 20857 | 88 | 20 | -28.6 | NP_570754 | 5' arm 3' arm | ||
| 13109 | + | 22155 | 89 | 21 | -19.5 | 5' arm 3' arm | |||
| 13107 | + | 18773 | 89 | 23.5 | -26.2 | NP_570752 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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