miRNA display CGI


Results 1 - 20 of 46 are showing below:
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GenBank Identifier RefSeq Acc. Name
23505445 NC_004313.1 Salmonella typhimurium phage ST64B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16931 + 29966 85 19 -21.4 NP_700414 5' arm      3' arm
16939 - 1066 86 19 -23.8 NP_700375 5' arm      3' arm
16940 - 2555 87 19 -22.6 NP_700377 5' arm      3' arm
16915 + 7889 90 19 -19.8 NP_700386 5' arm      3' arm
16924 + 16136 90 19 -20.2 NP_700395 5' arm      3' arm
16941 - 3042 79 19 -21.9 NP_700377 5' arm      3' arm
16954 - 34192 87 19 -21.2 NP_700419 5' arm      3' arm
16948 - 13578 79 19 -20.2 NP_700391 5' arm      3' arm
16953 - 31171 90 19 -21.8 NP_700415 5' arm      3' arm
16922 + 11829 89 19 -21 NP_700389 5' arm      3' arm
16942 - 6806 89 19.5 -28.3 NP_700383 5' arm      3' arm
16930 + 29542 90 19.5 -20.6 NP_700413 5' arm      3' arm
16951 - 24281 84 19.5 -23 NP_700405 5' arm      3' arm
16935 + 34023 89 19.5 -21.1 NP_700419 5' arm      3' arm
16914 + 6992 87 19.5 -25 NP_700384 5' arm      3' arm
16936 + 34615 87 19.5 -24.3 NP_700420 5' arm      3' arm
16945 - 8795 86 20 -19.6 NP_700386 5' arm      3' arm
16917 + 8707 89 20 -26.9 NP_700386 5' arm      3' arm
16938 + 36955 90 20 -23.6 5' arm      3' arm
16950 - 14277 89 20 -24.5 NP_700391 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.