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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 12327 | + | 8099 | 88 | 20 | -25.31 | NP_542271 | 5' arm 3' arm | ||
| 12325 | + | 6278 | 90 | 22.5 | -23.24 | NP_542268 | 5' arm 3' arm | ||
| 12324 | + | 4844 | 89 | 20.5 | -24.3 | NP_542267 | 5' arm 3' arm | ||
| 12321 | + | 1457 | 90 | 20.5 | -23 | NP_542261 | 5' arm 3' arm | ||
| 12322 | + | 3509 | 89 | 23 | -32 | NP_542265 | 5' arm 3' arm | ||
| 12335 | + | 16900 | 87 | 21 | -24.5 | 5' arm 3' arm | |||
| 12338 | + | 18309 | 89 | 21 | -31.3 | NP_542283 | 5' arm 3' arm | ||
| 12348 | + | 23204 | 90 | 22.5 | -19.5 | NP_542290 | 5' arm 3' arm | ||
| 12351 | + | 24022 | 89 | 24 | -21.4 | NP_542291 | 5' arm 3' arm | ||
| 12347 | + | 22612 | 90 | 20 | -19.6 | NP_542283 | 5' arm 3' arm | ||
| 12344 | + | 20471 | 89 | 20 | -31.6 | NP_542287 | 5' arm 3' arm | ||
| 12343 | + | 19634 | 90 | 20 | -20 | NP_542285 | 5' arm 3' arm | ||
| 12341 | + | 19246 | 87 | 20 | -20.5 | NP_542283 | 5' arm 3' arm | ||
| 12340 | + | 18751 | 90 | 20 | -25.2 | NP_542283 | 5' arm 3' arm | ||
| 12346 | + | 21957 | 90 | 20.5 | -20.2 | NP_542290 | 5' arm 3' arm | ||
| 12345 | + | 21527 | 90 | 21.5 | -25.9 | NP_542283 | 5' arm 3' arm | ||
| 12339 | + | 18508 | 88 | 21.5 | -20.7 | NP_542284 | 5' arm 3' arm | ||
| 12342 | + | 19424 | 90 | 22 | -24.3 | NP_542285 | 5' arm 3' arm | ||
| 12332 | + | 14453 | 89 | 19.5 | -27 | NP_542279 | 5' arm 3' arm | ||
| 12333 | + | 15998 | 89 | 20.5 | -29.2 | NP_542281 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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