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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12499 | - | 57384 | 90 | 22 | -26.3 | 5' arm 3' arm | |||
| 12360 | + | 27857 | 90 | 20 | -26.2 | NP_542294 | 5' arm 3' arm | ||
| 12409 | - | 2498 | 87 | 21.5 | -26.1 | NP_542262 | 5' arm 3' arm | ||
| 12345 | + | 21527 | 90 | 21.5 | -25.9 | NP_542283 | 5' arm 3' arm | ||
| 12458 | - | 33786 | 88 | 20 | -25.9 | NP_542298 | 5' arm 3' arm | ||
| 12451 | - | 29897 | 89 | 19 | -25.9 | NP_542295 | 5' arm 3' arm | ||
| 12366 | + | 31054 | 90 | 21.5 | -25.8 | NP_542293 | 5' arm 3' arm | ||
| 12462 | - | 38148 | 90 | 21 | -25.8 | NP_542306 | 5' arm 3' arm | ||
| 12448 | - | 28809 | 89 | 19.5 | -25.8 | NP_542294 | 5' arm 3' arm | ||
| 12326 | + | 7658 | 86 | 19.5 | -25.7 | NP_542270 | 5' arm 3' arm | ||
| 12465 | - | 40245 | 90 | 23.5 | -25.7 | NP_542308 | 5' arm 3' arm | ||
| 12473 | - | 43000 | 86 | 21 | -25.7 | NP_542313 | 5' arm 3' arm | ||
| 12456 | - | 32545 | 86 | 20.5 | -25.5 | NP_542293 | 5' arm 3' arm | ||
| 12391 | + | 45151 | 86 | 21 | -25.5 | NP_542317 | 5' arm 3' arm | ||
| 12327 | + | 8099 | 88 | 20 | -25.31 | NP_542271 | 5' arm 3' arm | ||
| 12459 | - | 33922 | 86 | 22 | -25.3 | 5' arm 3' arm | |||
| 12371 | + | 33415 | 90 | 19.5 | -25.3 | NP_542298 | 5' arm 3' arm | ||
| 12464 | - | 39568 | 89 | 20.5 | -25.2 | NP_542306 | 5' arm 3' arm | ||
| 12340 | + | 18751 | 90 | 20 | -25.2 | NP_542283 | 5' arm 3' arm | ||
| 12467 | - | 41603 | 87 | 19.5 | -25.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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