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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12423 | - | 8344 | 89 | 21.5 | -28.1 | NP_542271 | 5' arm 3' arm | ||
| 12474 | - | 43170 | 90 | 22 | -27.9 | NP_542313 | 5' arm 3' arm | ||
| 12442 | - | 21598 | 88 | 20.5 | -27.9 | NP_542286 | 5' arm 3' arm | ||
| 12376 | + | 35024 | 90 | 23 | -27.8 | NP_542302 | 5' arm 3' arm | ||
| 12384 | + | 40248 | 88 | 19.5 | -27.8 | NP_542308 | 5' arm 3' arm | ||
| 12455 | - | 32182 | 90 | 20 | -27.7 | NP_542296 | 5' arm 3' arm | ||
| 12354 | + | 25005 | 89 | 22 | -27.6 | NP_542283 | 5' arm 3' arm | ||
| 12446 | - | 26555 | 90 | 21.5 | -27.4 | NP_542293 | 5' arm 3' arm | ||
| 12483 | - | 49831 | 90 | 22.5 | -27.4 | NP_542326 | 5' arm 3' arm | ||
| 12425 | - | 9853 | 90 | 20.5 | -27.4 | NP_542274 | 5' arm 3' arm | ||
| 12323 | + | 3928 | 88 | 23.5 | -27.2 | NP_542266 | 5' arm 3' arm | ||
| 12364 | + | 29281 | 90 | 22.5 | -27.2 | NP_542295 | 5' arm 3' arm | ||
| 12402 | + | 54276 | 90 | 20.5 | -27 | NP_542336 | 5' arm 3' arm | ||
| 12332 | + | 14453 | 89 | 19.5 | -27 | NP_542279 | 5' arm 3' arm | ||
| 12495 | - | 56204 | 89 | 20.5 | -26.9 | NP_542342 | 5' arm 3' arm | ||
| 12414 | - | 4574 | 90 | 22 | -26.8 | NP_542266 | 5' arm 3' arm | ||
| 12373 | + | 33835 | 89 | 24 | -26.7 | 5' arm 3' arm | |||
| 12411 | - | 3564 | 88 | 22 | -26.6 | NP_542265 | 5' arm 3' arm | ||
| 12408 | - | 2340 | 90 | 21 | -26.5 | 5' arm 3' arm | |||
| 12419 | - | 5808 | 90 | 22.5 | -26.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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