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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12322 | + | 3509 | 89 | 23 | -32 | NP_542265 | 5' arm 3' arm | ||
| 12411 | - | 3564 | 88 | 22 | -26.6 | NP_542265 | 5' arm 3' arm | ||
| 12415 | - | 4687 | 85 | 20.5 | -20.8 | NP_542266 | 5' arm 3' arm | ||
| 12416 | - | 4931 | 87 | 19.5 | -20.7 | NP_542266 | 5' arm 3' arm | ||
| 12417 | - | 5127 | 90 | 22 | -29.2 | NP_542266 | 5' arm 3' arm | ||
| 12323 | + | 3928 | 88 | 23.5 | -27.2 | NP_542266 | 5' arm 3' arm | ||
| 12414 | - | 4574 | 90 | 22 | -26.8 | NP_542266 | 5' arm 3' arm | ||
| 12413 | - | 4364 | 90 | 21.5 | -23.6 | NP_542267 | 5' arm 3' arm | ||
| 12324 | + | 4844 | 89 | 20.5 | -24.3 | NP_542267 | 5' arm 3' arm | ||
| 12412 | - | 4175 | 87 | 20 | -20.5 | NP_542267 | 5' arm 3' arm | ||
| 12421 | - | 6544 | 87 | 24.5 | -23.8 | NP_542268 | 5' arm 3' arm | ||
| 12422 | - | 6891 | 88 | 23.5 | -21.1 | NP_542268 | 5' arm 3' arm | ||
| 12325 | + | 6278 | 90 | 22.5 | -23.24 | NP_542268 | 5' arm 3' arm | ||
| 12326 | + | 7658 | 86 | 19.5 | -25.7 | NP_542270 | 5' arm 3' arm | ||
| 12327 | + | 8099 | 88 | 20 | -25.31 | NP_542271 | 5' arm 3' arm | ||
| 12423 | - | 8344 | 89 | 21.5 | -28.1 | NP_542271 | 5' arm 3' arm | ||
| 12424 | - | 8742 | 86 | 22.5 | -20.1 | NP_542272 | 5' arm 3' arm | ||
| 12328 | + | 9613 | 89 | 20 | -28.9 | NP_542273 | 5' arm 3' arm | ||
| 12425 | - | 9853 | 90 | 20.5 | -27.4 | NP_542274 | 5' arm 3' arm | ||
| 12427 | - | 11234 | 88 | 20.5 | -31.8 | NP_542276 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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