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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12355 | + | 25329 | 83 | 19.5 | -20.6 | NP_542283 | 5' arm 3' arm | ||
| 12407 | - | 1384 | 87 | 19.5 | -23 | NP_542261 | 5' arm 3' arm | ||
| 12416 | - | 4931 | 87 | 19.5 | -20.7 | NP_542266 | 5' arm 3' arm | ||
| 12384 | + | 40248 | 88 | 19.5 | -27.8 | NP_542308 | 5' arm 3' arm | ||
| 12470 | - | 42405 | 90 | 19.5 | -21.2 | NP_542311 | 5' arm 3' arm | ||
| 12396 | + | 48819 | 89 | 19.5 | -19.6 | NP_542325 | 5' arm 3' arm | ||
| 12477 | - | 47215 | 90 | 19.5 | -24.2 | 5' arm 3' arm | |||
| 12467 | - | 41603 | 87 | 19.5 | -25.1 | 5' arm 3' arm | |||
| 12332 | + | 14453 | 89 | 19.5 | -27 | NP_542279 | 5' arm 3' arm | ||
| 12468 | - | 41881 | 89 | 19.5 | -20.4 | NP_542311 | 5' arm 3' arm | ||
| 12497 | - | 56652 | 87 | 19.5 | -31.6 | NP_542343 | 5' arm 3' arm | ||
| 12448 | - | 28809 | 89 | 19.5 | -25.8 | NP_542294 | 5' arm 3' arm | ||
| 12404 | + | 56626 | 90 | 19.5 | -20.2 | NP_542343 | 5' arm 3' arm | ||
| 12457 | - | 32755 | 88 | 19.5 | -24.6 | 5' arm 3' arm | |||
| 12488 | - | 52384 | 87 | 19.5 | -25.1 | NP_542334 | 5' arm 3' arm | ||
| 12452 | - | 31667 | 90 | 19.5 | -20.1 | NP_542293 | 5' arm 3' arm | ||
| 12326 | + | 7658 | 86 | 19.5 | -25.7 | NP_542270 | 5' arm 3' arm | ||
| 12440 | - | 19512 | 88 | 19.5 | -24.7 | NP_542283 | 5' arm 3' arm | ||
| 12494 | - | 55544 | 90 | 19.5 | -19.9 | NP_542337 | 5' arm 3' arm | ||
| 12478 | - | 47908 | 90 | 19.5 | -20.8 | NP_542323 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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