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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12353 | + | 24821 | 90 | 22.5 | -19.4 | NP_542283 | 5' arm 3' arm | ||
| 12364 | + | 29281 | 90 | 22.5 | -27.2 | NP_542295 | 5' arm 3' arm | ||
| 12429 | - | 11743 | 90 | 22.5 | -19.7 | NP_542277 | 5' arm 3' arm | ||
| 12428 | - | 11507 | 90 | 22.5 | -20.8 | NP_542276 | 5' arm 3' arm | ||
| 12424 | - | 8742 | 86 | 22.5 | -20.1 | NP_542272 | 5' arm 3' arm | ||
| 12479 | - | 48550 | 90 | 22.5 | -20.8 | NP_542324 | 5' arm 3' arm | ||
| 12325 | + | 6278 | 90 | 22.5 | -23.24 | NP_542268 | 5' arm 3' arm | ||
| 12370 | + | 32746 | 90 | 22.5 | -33.8 | 5' arm 3' arm | |||
| 12483 | - | 49831 | 90 | 22.5 | -27.4 | NP_542326 | 5' arm 3' arm | ||
| 12419 | - | 5808 | 90 | 22.5 | -26.5 | 5' arm 3' arm | |||
| 12450 | - | 29781 | 89 | 22.5 | -22 | NP_542295 | 5' arm 3' arm | ||
| 12405 | + | 56770 | 89 | 22.5 | -22.6 | NP_542343 | 5' arm 3' arm | ||
| 12474 | - | 43170 | 90 | 22 | -27.9 | NP_542313 | 5' arm 3' arm | ||
| 12476 | - | 45518 | 86 | 22 | -23.1 | NP_542317 | 5' arm 3' arm | ||
| 12499 | - | 57384 | 90 | 22 | -26.3 | 5' arm 3' arm | |||
| 12459 | - | 33922 | 86 | 22 | -25.3 | 5' arm 3' arm | |||
| 12400 | + | 50433 | 90 | 22 | -30.01 | NP_542328 | 5' arm 3' arm | ||
| 12352 | + | 24484 | 89 | 22 | -23.6 | NP_542291 | 5' arm 3' arm | ||
| 12337 | + | 17823 | 87 | 22 | -22.52 | NP_542283 | 5' arm 3' arm | ||
| 12491 | - | 54540 | 87 | 22 | -28.2 | NP_542336 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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