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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12399 | + | 49628 | 90 | 22 | -20.9 | NP_542326 | 5' arm 3' arm | ||
| 12491 | - | 54540 | 87 | 22 | -28.2 | NP_542336 | 5' arm 3' arm | ||
| 12476 | - | 45518 | 86 | 22 | -23.1 | NP_542317 | 5' arm 3' arm | ||
| 12417 | - | 5127 | 90 | 22 | -29.2 | NP_542266 | 5' arm 3' arm | ||
| 12499 | - | 57384 | 90 | 22 | -26.3 | 5' arm 3' arm | |||
| 12352 | + | 24484 | 89 | 22 | -23.6 | NP_542291 | 5' arm 3' arm | ||
| 12354 | + | 25005 | 89 | 22 | -27.6 | NP_542283 | 5' arm 3' arm | ||
| 12357 | + | 26819 | 88 | 22 | -24.7 | NP_542294 | 5' arm 3' arm | ||
| 12358 | + | 27044 | 87 | 22 | -22.7 | NP_542293 | 5' arm 3' arm | ||
| 12459 | - | 33922 | 86 | 22 | -25.3 | 5' arm 3' arm | |||
| 12441 | - | 20583 | 87 | 22 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12474 | - | 43170 | 90 | 22 | -27.9 | NP_542313 | 5' arm 3' arm | ||
| 12337 | + | 17823 | 87 | 22 | -22.52 | NP_542283 | 5' arm 3' arm | ||
| 12381 | + | 38377 | 89 | 21.5 | -22.2 | NP_542305 | 5' arm 3' arm | ||
| 12334 | + | 16533 | 89 | 21.5 | -33.5 | NP_542282 | 5' arm 3' arm | ||
| 12375 | + | 34755 | 89 | 21.5 | -22.7 | NP_542301 | 5' arm 3' arm | ||
| 12336 | + | 17201 | 90 | 21.5 | -25.1 | NP_542283 | 5' arm 3' arm | ||
| 12434 | - | 14681 | 90 | 21.5 | -23.5 | NP_542279 | 5' arm 3' arm | ||
| 12446 | - | 26555 | 90 | 21.5 | -27.4 | NP_542293 | 5' arm 3' arm | ||
| 12385 | + | 40561 | 90 | 21.5 | -22.7 | NP_542309 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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