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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12443 | - | 22044 | 88 | 21.5 | -22.9 | NP_542283 | 5' arm 3' arm | ||
| 12413 | - | 4364 | 90 | 21.5 | -23.6 | NP_542267 | 5' arm 3' arm | ||
| 12345 | + | 21527 | 90 | 21.5 | -25.9 | NP_542283 | 5' arm 3' arm | ||
| 12375 | + | 34755 | 89 | 21.5 | -22.7 | NP_542301 | 5' arm 3' arm | ||
| 12435 | - | 17365 | 89 | 21.5 | -23.3 | NP_542284 | 5' arm 3' arm | ||
| 12336 | + | 17201 | 90 | 21.5 | -25.1 | NP_542283 | 5' arm 3' arm | ||
| 12366 | + | 31054 | 90 | 21.5 | -25.8 | NP_542293 | 5' arm 3' arm | ||
| 12446 | - | 26555 | 90 | 21.5 | -27.4 | NP_542293 | 5' arm 3' arm | ||
| 12434 | - | 14681 | 90 | 21.5 | -23.5 | NP_542279 | 5' arm 3' arm | ||
| 12334 | + | 16533 | 89 | 21.5 | -33.5 | NP_542282 | 5' arm 3' arm | ||
| 12381 | + | 38377 | 89 | 21.5 | -22.2 | NP_542305 | 5' arm 3' arm | ||
| 12339 | + | 18508 | 88 | 21.5 | -20.7 | NP_542284 | 5' arm 3' arm | ||
| 12466 | - | 41400 | 90 | 21.5 | -19.6 | NP_542310 | 5' arm 3' arm | ||
| 12461 | - | 34518 | 90 | 21 | -22.7 | NP_542299 | 5' arm 3' arm | ||
| 12462 | - | 38148 | 90 | 21 | -25.8 | NP_542306 | 5' arm 3' arm | ||
| 12469 | - | 42250 | 86 | 21 | -24.8 | NP_542311 | 5' arm 3' arm | ||
| 12335 | + | 16900 | 87 | 21 | -24.5 | 5' arm 3' arm | |||
| 12382 | + | 38577 | 84 | 21 | -20.6 | NP_542306 | 5' arm 3' arm | ||
| 12372 | + | 33556 | 87 | 21 | -19.9 | NP_542298 | 5' arm 3' arm | ||
| 12380 | + | 38108 | 90 | 21 | -20.8 | NP_542305 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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