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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12438 | - | 18840 | 90 | 20.5 | -24.6 | NP_542283 | 5' arm 3' arm | ||
| 12347 | + | 22612 | 90 | 20 | -19.6 | NP_542283 | 5' arm 3' arm | ||
| 12444 | - | 23244 | 88 | 21 | -23.3 | NP_542283 | 5' arm 3' arm | ||
| 12355 | + | 25329 | 83 | 19.5 | -20.6 | NP_542283 | 5' arm 3' arm | ||
| 12436 | - | 17662 | 90 | 21 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12441 | - | 20583 | 87 | 22 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12349 | + | 23603 | 87 | 19.5 | -25 | NP_542283 | 5' arm 3' arm | ||
| 12439 | - | 19092 | 89 | 19 | -22.7 | NP_542283 | 5' arm 3' arm | ||
| 12354 | + | 25005 | 89 | 22 | -27.6 | NP_542283 | 5' arm 3' arm | ||
| 12353 | + | 24821 | 90 | 22.5 | -19.4 | NP_542283 | 5' arm 3' arm | ||
| 12443 | - | 22044 | 88 | 21.5 | -22.9 | NP_542283 | 5' arm 3' arm | ||
| 12339 | + | 18508 | 88 | 21.5 | -20.7 | NP_542284 | 5' arm 3' arm | ||
| 12437 | - | 18149 | 90 | 21 | -24.1 | NP_542284 | 5' arm 3' arm | ||
| 12435 | - | 17365 | 89 | 21.5 | -23.3 | NP_542284 | 5' arm 3' arm | ||
| 12342 | + | 19424 | 90 | 22 | -24.3 | NP_542285 | 5' arm 3' arm | ||
| 12343 | + | 19634 | 90 | 20 | -20 | NP_542285 | 5' arm 3' arm | ||
| 12442 | - | 21598 | 88 | 20.5 | -27.9 | NP_542286 | 5' arm 3' arm | ||
| 12344 | + | 20471 | 89 | 20 | -31.6 | NP_542287 | 5' arm 3' arm | ||
| 12346 | + | 21957 | 90 | 20.5 | -20.2 | NP_542290 | 5' arm 3' arm | ||
| 12348 | + | 23204 | 90 | 22.5 | -19.5 | NP_542290 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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