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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12379 | + | 37626 | 88 | 24.5 | -21.9 | NP_542304 | 5' arm 3' arm | ||
| 12377 | + | 35350 | 90 | 23.5 | -20.6 | NP_542303 | 5' arm 3' arm | ||
| 12378 | + | 35761 | 89 | 20.5 | -19.7 | NP_542303 | 5' arm 3' arm | ||
| 12376 | + | 35024 | 90 | 23 | -27.8 | NP_542302 | 5' arm 3' arm | ||
| 12375 | + | 34755 | 89 | 21.5 | -22.7 | NP_542301 | 5' arm 3' arm | ||
| 12374 | + | 34456 | 90 | 23.5 | -22.5 | NP_542300 | 5' arm 3' arm | ||
| 12461 | - | 34518 | 90 | 21 | -22.7 | NP_542299 | 5' arm 3' arm | ||
| 12371 | + | 33415 | 90 | 19.5 | -25.3 | NP_542298 | 5' arm 3' arm | ||
| 12372 | + | 33556 | 87 | 21 | -19.9 | NP_542298 | 5' arm 3' arm | ||
| 12458 | - | 33786 | 88 | 20 | -25.9 | NP_542298 | 5' arm 3' arm | ||
| 12455 | - | 32182 | 90 | 20 | -27.7 | NP_542296 | 5' arm 3' arm | ||
| 12365 | + | 29821 | 90 | 23.5 | -21.3 | NP_542295 | 5' arm 3' arm | ||
| 12450 | - | 29781 | 89 | 22.5 | -22 | NP_542295 | 5' arm 3' arm | ||
| 12451 | - | 29897 | 89 | 19 | -25.9 | NP_542295 | 5' arm 3' arm | ||
| 12364 | + | 29281 | 90 | 22.5 | -27.2 | NP_542295 | 5' arm 3' arm | ||
| 12360 | + | 27857 | 90 | 20 | -26.2 | NP_542294 | 5' arm 3' arm | ||
| 12448 | - | 28809 | 89 | 19.5 | -25.8 | NP_542294 | 5' arm 3' arm | ||
| 12361 | + | 28270 | 86 | 22 | -29.6 | NP_542294 | 5' arm 3' arm | ||
| 12359 | + | 27150 | 87 | 19 | -22.24 | NP_542294 | 5' arm 3' arm | ||
| 12357 | + | 26819 | 88 | 22 | -24.7 | NP_542294 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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