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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12488 | - | 52384 | 87 | 19.5 | -25.1 | NP_542334 | 5' arm 3' arm | ||
| 12467 | - | 41603 | 87 | 19.5 | -25.1 | 5' arm 3' arm | |||
| 12336 | + | 17201 | 90 | 21.5 | -25.1 | NP_542283 | 5' arm 3' arm | ||
| 12393 | + | 45662 | 89 | 19 | -25 | NP_542318 | 5' arm 3' arm | ||
| 12349 | + | 23603 | 87 | 19.5 | -25 | NP_542283 | 5' arm 3' arm | ||
| 12481 | - | 49293 | 89 | 21 | -24.9 | NP_542326 | 5' arm 3' arm | ||
| 12469 | - | 42250 | 86 | 21 | -24.8 | NP_542311 | 5' arm 3' arm | ||
| 12356 | + | 26466 | 90 | 21 | -24.71 | NP_542293 | 5' arm 3' arm | ||
| 12440 | - | 19512 | 88 | 19.5 | -24.7 | NP_542283 | 5' arm 3' arm | ||
| 12357 | + | 26819 | 88 | 22 | -24.7 | NP_542294 | 5' arm 3' arm | ||
| 12438 | - | 18840 | 90 | 20.5 | -24.6 | NP_542283 | 5' arm 3' arm | ||
| 12457 | - | 32755 | 88 | 19.5 | -24.6 | 5' arm 3' arm | |||
| 12335 | + | 16900 | 87 | 21 | -24.5 | 5' arm 3' arm | |||
| 12398 | + | 49408 | 88 | 19 | -24.4 | NP_542326 | 5' arm 3' arm | ||
| 12342 | + | 19424 | 90 | 22 | -24.3 | NP_542285 | 5' arm 3' arm | ||
| 12324 | + | 4844 | 89 | 20.5 | -24.3 | NP_542267 | 5' arm 3' arm | ||
| 12472 | - | 42772 | 81 | 19 | -24.2 | NP_542312 | 5' arm 3' arm | ||
| 12445 | - | 24501 | 85 | 20 | -24.2 | NP_542291 | 5' arm 3' arm | ||
| 12367 | + | 31490 | 90 | 19.5 | -24.2 | NP_542293 | 5' arm 3' arm | ||
| 12477 | - | 47215 | 90 | 19.5 | -24.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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