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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12480 | - | 48846 | 87 | 26.5 | -22.5 | NP_542324 | 5' arm 3' arm | ||
| 12421 | - | 6544 | 87 | 24.5 | -23.8 | NP_542268 | 5' arm 3' arm | ||
| 12379 | + | 37626 | 88 | 24.5 | -21.9 | NP_542304 | 5' arm 3' arm | ||
| 12498 | - | 57243 | 90 | 24 | -23 | 5' arm 3' arm | |||
| 12373 | + | 33835 | 89 | 24 | -26.7 | 5' arm 3' arm | |||
| 12351 | + | 24022 | 89 | 24 | -21.4 | NP_542291 | 5' arm 3' arm | ||
| 12465 | - | 40245 | 90 | 23.5 | -25.7 | NP_542308 | 5' arm 3' arm | ||
| 12422 | - | 6891 | 88 | 23.5 | -21.1 | NP_542268 | 5' arm 3' arm | ||
| 12323 | + | 3928 | 88 | 23.5 | -27.2 | NP_542266 | 5' arm 3' arm | ||
| 12374 | + | 34456 | 90 | 23.5 | -22.5 | NP_542300 | 5' arm 3' arm | ||
| 12433 | - | 14409 | 90 | 23.5 | -21.4 | NP_542279 | 5' arm 3' arm | ||
| 12377 | + | 35350 | 90 | 23.5 | -20.6 | NP_542303 | 5' arm 3' arm | ||
| 12365 | + | 29821 | 90 | 23.5 | -21.3 | NP_542295 | 5' arm 3' arm | ||
| 12331 | + | 12484 | 88 | 23.5 | -21.6 | NP_542277 | 5' arm 3' arm | ||
| 12449 | - | 29181 | 90 | 23.5 | -29.1 | NP_542293 | 5' arm 3' arm | ||
| 12486 | - | 51025 | 89 | 23.5 | -20.3 | NP_542330 | 5' arm 3' arm | ||
| 12460 | - | 34225 | 90 | 23 | -23.7 | 5' arm 3' arm | |||
| 12376 | + | 35024 | 90 | 23 | -27.8 | NP_542302 | 5' arm 3' arm | ||
| 12322 | + | 3509 | 89 | 23 | -32 | NP_542265 | 5' arm 3' arm | ||
| 12483 | - | 49831 | 90 | 22.5 | -27.4 | NP_542326 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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