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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12330 | + | 11543 | 90 | 19 | -31.1 | NP_542277 | 5' arm 3' arm | ||
| 12359 | + | 27150 | 87 | 19 | -22.24 | NP_542294 | 5' arm 3' arm | ||
| 12490 | - | 54009 | 90 | 19 | -23.5 | NP_542336 | 5' arm 3' arm | ||
| 12451 | - | 29897 | 89 | 19 | -25.9 | NP_542295 | 5' arm 3' arm | ||
| 12472 | - | 42772 | 81 | 19 | -24.2 | NP_542312 | 5' arm 3' arm | ||
| 12484 | - | 50407 | 86 | 19 | -24 | NP_542328 | 5' arm 3' arm | ||
| 12453 | - | 31768 | 88 | 19 | -23.8 | NP_542293 | 5' arm 3' arm | ||
| 12393 | + | 45662 | 89 | 19 | -25 | NP_542318 | 5' arm 3' arm | ||
| 12403 | + | 55186 | 87 | 19 | -28.9 | NP_542339 | 5' arm 3' arm | ||
| 12487 | - | 51530 | 87 | 19 | -23.6 | NP_542331 | 5' arm 3' arm | ||
| 12369 | + | 32490 | 87 | 19 | -20.8 | NP_542293 | 5' arm 3' arm | ||
| 12368 | + | 32232 | 86 | 19 | -23.8 | NP_542293 | 5' arm 3' arm | ||
| 12493 | - | 55434 | 88 | 19 | -22.6 | NP_542339 | 5' arm 3' arm | ||
| 12398 | + | 49408 | 88 | 19 | -24.4 | NP_542326 | 5' arm 3' arm | ||
| 12439 | - | 19092 | 89 | 19 | -22.7 | NP_542283 | 5' arm 3' arm | ||
| 12349 | + | 23603 | 87 | 19.5 | -25 | NP_542283 | 5' arm 3' arm | ||
| 12326 | + | 7658 | 86 | 19.5 | -25.7 | NP_542270 | 5' arm 3' arm | ||
| 12397 | + | 49086 | 90 | 19.5 | -22.5 | NP_542326 | 5' arm 3' arm | ||
| 12497 | - | 56652 | 87 | 19.5 | -31.6 | NP_542343 | 5' arm 3' arm | ||
| 12494 | - | 55544 | 90 | 19.5 | -19.9 | NP_542337 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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