miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12321	+	1457	90	20.5	-23	NP_542261		5' arm      3' arm
12322	+	3509	89	23	-32	NP_542265		5' arm      3' arm
12323	+	3928	88	23.5	-27.2	NP_542266		5' arm      3' arm
12324	+	4844	89	20.5	-24.3	NP_542267		5' arm      3' arm
12325	+	6278	90	22.5	-23.24	NP_542268		5' arm      3' arm
12326	+	7658	86	19.5	-25.7	NP_542270		5' arm      3' arm
12327	+	8099	88	20	-25.31	NP_542271		5' arm      3' arm
12328	+	9613	89	20	-28.9	NP_542273		5' arm      3' arm
12329	+	10636	88	20.5	-22.8	NP_542276		5' arm      3' arm
12330	+	11543	90	19	-31.1	NP_542277		5' arm      3' arm
12331	+	12484	88	23.5	-21.6	NP_542277		5' arm      3' arm
12332	+	14453	89	19.5	-27	NP_542279		5' arm      3' arm
12333	+	15998	89	20.5	-29.2	NP_542281		5' arm      3' arm
12334	+	16533	89	21.5	-33.5	NP_542282		5' arm      3' arm
12335	+	16900	87	21	-24.5			5' arm      3' arm
12336	+	17201	90	21.5	-25.1	NP_542283		5' arm      3' arm
12337	+	17823	87	22	-22.52	NP_542283		5' arm      3' arm
12338	+	18309	89	21	-31.3	NP_542283		5' arm      3' arm
12339	+	18508	88	21.5	-20.7	NP_542284		5' arm      3' arm
12340	+	18751	90	20	-25.2	NP_542283		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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