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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12482 | - | 49598 | 90 | 20 | -25.1 | NP_542326 | 5' arm 3' arm | ||
| 12398 | + | 49408 | 88 | 19 | -24.4 | NP_542326 | 5' arm 3' arm | ||
| 12397 | + | 49086 | 90 | 19.5 | -22.5 | NP_542326 | 5' arm 3' arm | ||
| 12399 | + | 49628 | 90 | 22 | -20.9 | NP_542326 | 5' arm 3' arm | ||
| 12481 | - | 49293 | 89 | 21 | -24.9 | NP_542326 | 5' arm 3' arm | ||
| 12483 | - | 49831 | 90 | 22.5 | -27.4 | NP_542326 | 5' arm 3' arm | ||
| 12396 | + | 48819 | 89 | 19.5 | -19.6 | NP_542325 | 5' arm 3' arm | ||
| 12479 | - | 48550 | 90 | 22.5 | -20.8 | NP_542324 | 5' arm 3' arm | ||
| 12480 | - | 48846 | 87 | 26.5 | -22.5 | NP_542324 | 5' arm 3' arm | ||
| 12478 | - | 47908 | 90 | 19.5 | -20.8 | NP_542323 | 5' arm 3' arm | ||
| 12395 | + | 46407 | 81 | 20.5 | -20.8 | NP_542320 | 5' arm 3' arm | ||
| 12394 | + | 46011 | 89 | 21.5 | -28.2 | NP_542319 | 5' arm 3' arm | ||
| 12393 | + | 45662 | 89 | 19 | -25 | NP_542318 | 5' arm 3' arm | ||
| 12390 | + | 44975 | 86 | 21.5 | -21.5 | NP_542317 | 5' arm 3' arm | ||
| 12392 | + | 45257 | 90 | 21 | -23.4 | NP_542317 | 5' arm 3' arm | ||
| 12475 | - | 45060 | 86 | 20.5 | -28.2 | NP_542317 | 5' arm 3' arm | ||
| 12476 | - | 45518 | 86 | 22 | -23.1 | NP_542317 | 5' arm 3' arm | ||
| 12391 | + | 45151 | 86 | 21 | -25.5 | NP_542317 | 5' arm 3' arm | ||
| 12389 | + | 44826 | 86 | 22 | -23.2 | NP_542316 | 5' arm 3' arm | ||
| 12388 | + | 44438 | 90 | 21 | -22.5 | NP_542316 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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