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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12405 | + | 56770 | 89 | 22.5 | -22.6 | NP_542343 | 5' arm 3' arm | ||
| 12404 | + | 56626 | 90 | 19.5 | -20.2 | NP_542343 | 5' arm 3' arm | ||
| 12497 | - | 56652 | 87 | 19.5 | -31.6 | NP_542343 | 5' arm 3' arm | ||
| 12495 | - | 56204 | 89 | 20.5 | -26.9 | NP_542342 | 5' arm 3' arm | ||
| 12496 | - | 56379 | 89 | 20.5 | -23.8 | NP_542342 | 5' arm 3' arm | ||
| 12493 | - | 55434 | 88 | 19 | -22.6 | NP_542339 | 5' arm 3' arm | ||
| 12403 | + | 55186 | 87 | 19 | -28.9 | NP_542339 | 5' arm 3' arm | ||
| 12492 | - | 55305 | 89 | 21.5 | -21.6 | NP_542338 | 5' arm 3' arm | ||
| 12494 | - | 55544 | 90 | 19.5 | -19.9 | NP_542337 | 5' arm 3' arm | ||
| 12491 | - | 54540 | 87 | 22 | -28.2 | NP_542336 | 5' arm 3' arm | ||
| 12490 | - | 54009 | 90 | 19 | -23.5 | NP_542336 | 5' arm 3' arm | ||
| 12402 | + | 54276 | 90 | 20.5 | -27 | NP_542336 | 5' arm 3' arm | ||
| 12489 | - | 53067 | 88 | 20 | -22.4 | NP_542335 | 5' arm 3' arm | ||
| 12488 | - | 52384 | 87 | 19.5 | -25.1 | NP_542334 | 5' arm 3' arm | ||
| 12401 | + | 51413 | 90 | 20 | -21.8 | NP_542332 | 5' arm 3' arm | ||
| 12487 | - | 51530 | 87 | 19 | -23.6 | NP_542331 | 5' arm 3' arm | ||
| 12486 | - | 51025 | 89 | 23.5 | -20.3 | NP_542330 | 5' arm 3' arm | ||
| 12485 | - | 50920 | 89 | 20.5 | -21.1 | NP_542329 | 5' arm 3' arm | ||
| 12400 | + | 50433 | 90 | 22 | -30.01 | NP_542328 | 5' arm 3' arm | ||
| 12484 | - | 50407 | 86 | 19 | -24 | NP_542328 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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