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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12341 | + | 19246 | 87 | 20 | -20.5 | NP_542283 | 5' arm 3' arm | ||
| 12412 | - | 4175 | 87 | 20 | -20.5 | NP_542267 | 5' arm 3' arm | ||
| 12382 | + | 38577 | 84 | 21 | -20.6 | NP_542306 | 5' arm 3' arm | ||
| 12377 | + | 35350 | 90 | 23.5 | -20.6 | NP_542303 | 5' arm 3' arm | ||
| 12355 | + | 25329 | 83 | 19.5 | -20.6 | NP_542283 | 5' arm 3' arm | ||
| 12339 | + | 18508 | 88 | 21.5 | -20.7 | NP_542284 | 5' arm 3' arm | ||
| 12416 | - | 4931 | 87 | 19.5 | -20.7 | NP_542266 | 5' arm 3' arm | ||
| 12428 | - | 11507 | 90 | 22.5 | -20.8 | NP_542276 | 5' arm 3' arm | ||
| 12479 | - | 48550 | 90 | 22.5 | -20.8 | NP_542324 | 5' arm 3' arm | ||
| 12415 | - | 4687 | 85 | 20.5 | -20.8 | NP_542266 | 5' arm 3' arm | ||
| 12380 | + | 38108 | 90 | 21 | -20.8 | NP_542305 | 5' arm 3' arm | ||
| 12369 | + | 32490 | 87 | 19 | -20.8 | NP_542293 | 5' arm 3' arm | ||
| 12478 | - | 47908 | 90 | 19.5 | -20.8 | NP_542323 | 5' arm 3' arm | ||
| 12395 | + | 46407 | 81 | 20.5 | -20.8 | NP_542320 | 5' arm 3' arm | ||
| 12441 | - | 20583 | 87 | 22 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12436 | - | 17662 | 90 | 21 | -20.9 | NP_542283 | 5' arm 3' arm | ||
| 12447 | - | 28614 | 90 | 20.5 | -20.9 | NP_542293 | 5' arm 3' arm | ||
| 12399 | + | 49628 | 90 | 22 | -20.9 | NP_542326 | 5' arm 3' arm | ||
| 12485 | - | 50920 | 89 | 20.5 | -21.1 | NP_542329 | 5' arm 3' arm | ||
| 12422 | - | 6891 | 88 | 23.5 | -21.1 | NP_542268 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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