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| GenBank Identifier | RefSeq Acc. | Name |
| 18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 12350 | + | 23822 | 90 | 21 | -21.2 | NP_542291 | 5' arm 3' arm | ||
| 12470 | - | 42405 | 90 | 19.5 | -21.2 | NP_542311 | 5' arm 3' arm | ||
| 12365 | + | 29821 | 90 | 23.5 | -21.3 | NP_542295 | 5' arm 3' arm | ||
| 12383 | + | 39590 | 90 | 20 | -21.4 | NP_542308 | 5' arm 3' arm | ||
| 12351 | + | 24022 | 89 | 24 | -21.4 | NP_542291 | 5' arm 3' arm | ||
| 12433 | - | 14409 | 90 | 23.5 | -21.4 | NP_542279 | 5' arm 3' arm | ||
| 12390 | + | 44975 | 86 | 21.5 | -21.5 | NP_542317 | 5' arm 3' arm | ||
| 12492 | - | 55305 | 89 | 21.5 | -21.6 | NP_542338 | 5' arm 3' arm | ||
| 12331 | + | 12484 | 88 | 23.5 | -21.6 | NP_542277 | 5' arm 3' arm | ||
| 12401 | + | 51413 | 90 | 20 | -21.8 | NP_542332 | 5' arm 3' arm | ||
| 12379 | + | 37626 | 88 | 24.5 | -21.9 | NP_542304 | 5' arm 3' arm | ||
| 12450 | - | 29781 | 89 | 22.5 | -22 | NP_542295 | 5' arm 3' arm | ||
| 12406 | - | 119 | 89 | 20 | -22.2 | 5' arm 3' arm | |||
| 12381 | + | 38377 | 89 | 21.5 | -22.2 | NP_542305 | 5' arm 3' arm | ||
| 12359 | + | 27150 | 87 | 19 | -22.24 | NP_542294 | 5' arm 3' arm | ||
| 12463 | - | 38606 | 90 | 20.5 | -22.3 | NP_542306 | 5' arm 3' arm | ||
| 12363 | + | 28723 | 88 | 20 | -22.3 | NP_542293 | 5' arm 3' arm | ||
| 12489 | - | 53067 | 88 | 20 | -22.4 | NP_542335 | 5' arm 3' arm | ||
| 12418 | - | 5382 | 87 | 21.5 | -22.4 | 5' arm 3' arm | |||
| 12397 | + | 49086 | 90 | 19.5 | -22.5 | NP_542326 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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