miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12273	-	53160	88	19	-23	NP_536427		5' arm      3' arm
12272	-	52588	89	21.5	-31.5	NP_536425		5' arm      3' arm
12271	-	52438	89	19.5	-20.1	NP_536425		5' arm      3' arm
12270	-	51546	85	19	-22.2	NP_536424		5' arm      3' arm
12269	-	50606	90	20	-19.4	NP_536424		5' arm
12268	-	50295	90	20	-27.51	NP_536423		5' arm      3' arm
12267	-	48844	84	20	-23.8			5' arm      3' arm
12266	-	48268	85	21	-34.8	NP_536418		5' arm      3' arm
12265	-	48008	90	25	-24.8			5' arm      3' arm
12264	-	47387	87	20	-23.1	NP_536417		5' arm      3' arm
12263	-	47029	89	21.5	-22.5	NP_536417		5' arm      3' arm
12262	-	45591	90	21	-21.9	NP_536414		5' arm      3' arm
12261	-	44670	89	19.5	-20.5	NP_536414		5' arm      3' arm
12260	-	44480	89	19.5	-21.4	NP_536413		5' arm      3' arm
12259	-	44307	86	22	-21	NP_536413		5' arm      3' arm
12258	-	44201	90	20	-22.3	NP_536413		5' arm      3' arm
12257	-	43407	88	21.5	-27.2	NP_536412		5' arm      3' arm
12256	-	41763	87	20.5	-24.2			5' arm      3' arm
12255	-	40675	85	21	-24.1	NP_536407		5' arm      3' arm
12254	-	40080	89	19.5	-19.82	NP_536406		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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