miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17645	-	26220	90	21.5	-21.2	NP_775225		5' arm      3' arm
17644	-	23781	88	20	-26.1	NP_775230		5' arm      3' arm
17643	-	21868	90	19.5	-31	NP_775233		5' arm      3' arm
17642	-	17470	87	22	-20.7	NP_775239		5' arm      3' arm
17641	-	16567	90	19.5	-20.6	NP_775239		5' arm      3' arm
17640	-	15883	90	21	-24.2	NP_775240		5' arm      3' arm
17639	-	15200	90	19.5	-23.2	NP_775240		5' arm      3' arm
17638	-	9782	88	21.5	-24.6	NP_775248		5' arm      3' arm
17637	-	8639	88	20.5	-28.1	NP_775251		5' arm      3' arm
17636	-	1092	90	20	-28.7			5' arm      3' arm
17635	-	983	89	21	-27.3			5' arm      3' arm
17634	+	44871	89	21	-27.6	NP_955001		5' arm      3' arm
17633	+	44514	81	20	-25.1			5' arm      3' arm
17632	+	44023	90	19.5	-20.8			5' arm      3' arm
17631	+	41834	88	23	-20.6	NP_775199		5' arm      3' arm
17630	+	41266	88	19	-20.8	NP_775201		5' arm      3' arm
17629	+	40191	88	20	-21.94	NP_775205		5' arm      3' arm
17628	+	39316	87	23	-26.4	NP_775207		5' arm      3' arm
17627	+	39138	90	19.5	-20.99	NP_775207		5' arm      3' arm
17626	+	38781	90	19.5	-20.3	NP_775207		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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