miRNA display CGI


Results 21 - 40 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
40549402 NC_004466.2 Pseudomonas aeruginosa phage PaP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17589 + 984 85 21 -25.9 5' arm      3' arm
17646 - 26401 90 19.5 -25.1 NP_775225 5' arm      3' arm
17633 + 44514 81 20 -25.1 5' arm      3' arm
17655 - 35257 89 21 -24.7 NP_775211 5' arm      3' arm
17638 - 9782 88 21.5 -24.6 NP_775248 5' arm      3' arm
17622 + 34848 87 23 -24.5 NP_775212 5' arm      3' arm
17594 + 5132 87 20 -24.4 NP_775254 5' arm      3' arm
17600 + 11253 80 19 -24.4 NP_775245 5' arm      3' arm
17609 + 17506 81 21.5 -24.4 NP_775239 5' arm      3' arm
17599 + 9842 88 25.5 -24.2 NP_775247 5' arm      3' arm
17640 - 15883 90 21 -24.2 NP_775240 5' arm      3' arm
17664 - 43944 88 19 -24.1 NP_775192 5' arm      3' arm
17623 + 37166 89 20 -23.9 NP_775209 5' arm      3' arm
17604 + 15112 90 21.5 -23.8 NP_775240 5' arm      3' arm
17592 + 3575 86 20 -23.3 NP_775255 5' arm      3' arm
17590 + 1948 90 19 -23.3 NP_775257 5' arm      3' arm
17639 - 15200 90 19.5 -23.2 NP_775240 5' arm      3' arm
17648 - 27519 84 19.5 -23 NP_775225 5' arm      3' arm
17615 + 27133 90 19.5 -22.9 NP_775225 5' arm      3' arm
17612 + 19958 88 19 -22.7 NP_775238 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.