miRNA display CGI


Results 21 - 40 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
40549402 NC_004466.2 Pseudomonas aeruginosa phage PaP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17611 + 19343 86 19 -21 NP_775239 5' arm      3' arm
17593 + 5010 88 24 -21 NP_775254 5' arm      3' arm
17610 + 17708 88 21.5 -21.1 NP_775239 5' arm      3' arm
17645 - 26220 90 21.5 -21.2 NP_775225 5' arm      3' arm
17595 + 5881 90 19 -21.5 NP_775254 5' arm      3' arm
17617 + 28033 90 22.5 -21.5 NP_775223 5' arm      3' arm
17614 + 23276 89 21 -21.6 NP_775230 5' arm      3' arm
17602 + 14134 90 25 -21.9 NP_775242 5' arm      3' arm
17629 + 40191 88 20 -21.94 NP_775205 5' arm      3' arm
17654 - 34774 90 20 -22.1 NP_775212 5' arm      3' arm
17620 + 32975 90 19 -22.2 NP_775214 5' arm      3' arm
17651 - 32824 90 21 -22.4 NP_775214 5' arm      3' arm
17650 - 32186 90 19.5 -22.4 NP_775215 5' arm      3' arm
17649 - 29199 89 24.5 -22.5 NP_775219 5' arm      3' arm
17619 + 30604 90 19 -22.5 NP_775217 5' arm      3' arm
17605 + 15460 90 22.5 -22.7 NP_775240 5' arm      3' arm
17647 - 26546 90 22 -22.7 NP_775225 5' arm      3' arm
17612 + 19958 88 19 -22.7 NP_775238 5' arm      3' arm
17616 + 27435 86 23.5 -22.7 NP_775225 5' arm      3' arm
17615 + 27133 90 19.5 -22.9 NP_775225 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.