miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17660	-	41479	90	23.5	-19.5	NP_775201		5' arm      3' arm
17624	+	38228	90	19.5	-19.6	NP_775208		5' arm      3' arm
17625	+	38445	88	21	-19.6	NP_775208		5' arm      3' arm
17621	+	34135	89	21	-19.7	NP_775212		5' arm      3' arm
17657	-	38183	90	20.5	-19.9	NP_775208		5' arm      3' arm
17656	-	35865	81	19	-20.2	NP_775211		5' arm      3' arm
17596	+	6429	90	24.5	-20.2			5' arm      3' arm
17598	+	9187	84	19.5	-20.3	NP_775249		5' arm      3' arm
17626	+	38781	90	19.5	-20.3	NP_775207		5' arm      3' arm
17607	+	16980	83	19	-20.4	NP_775239		5' arm      3' arm
17597	+	8253	90	19	-20.5	NP_775251		5' arm      3' arm
17606	+	16878	87	22	-20.6	NP_775239		5' arm      3' arm
17631	+	41834	88	23	-20.6	NP_775199		5' arm      3' arm
17641	-	16567	90	19.5	-20.6	NP_775239		5' arm      3' arm
17601	+	13627	89	22	-20.7	NP_775242		5' arm      3' arm
17642	-	17470	87	22	-20.7	NP_775239		5' arm      3' arm
17630	+	41266	88	19	-20.8	NP_775201		5' arm      3' arm
17632	+	44023	90	19.5	-20.8			5' arm      3' arm
17663	-	43246	89	19.5	-20.9	NP_775194		5' arm      3' arm
17627	+	39138	90	19.5	-20.99	NP_775207		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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