miRNA display CGI


Results 1 - 20 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
40549402 NC_004466.2 Pseudomonas aeruginosa phage PaP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17632 + 44023 90 19.5 -20.8 5' arm      3' arm
17635 - 983 89 21 -27.3 5' arm      3' arm
17633 + 44514 81 20 -25.1 5' arm      3' arm
17596 + 6429 90 24.5 -20.2 5' arm      3' arm
17636 - 1092 90 20 -28.7 5' arm      3' arm
17613 + 20826 89 19.5 -30.3 5' arm      3' arm
17589 + 984 85 21 -25.9 5' arm      3' arm
17588 + 562 87 22.5 -26 5' arm      3' arm
17658 - 39683 89 19.5 -34.9 5' arm      3' arm
17665 - 44598 89 21.5 -32 NP_775189 5' arm      3' arm
17664 - 43944 88 19 -24.1 NP_775192 5' arm      3' arm
17663 - 43246 89 19.5 -20.9 NP_775194 5' arm      3' arm
17662 - 43052 89 20 -29.6 NP_775195 5' arm      3' arm
17631 + 41834 88 23 -20.6 NP_775199 5' arm      3' arm
17660 - 41479 90 23.5 -19.5 NP_775201 5' arm      3' arm
17630 + 41266 88 19 -20.8 NP_775201 5' arm      3' arm
17659 - 40959 86 19 -26 NP_775203 5' arm      3' arm
17629 + 40191 88 20 -21.94 NP_775205 5' arm      3' arm
17626 + 38781 90 19.5 -20.3 NP_775207 5' arm      3' arm
17628 + 39316 87 23 -26.4 NP_775207 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.