miRNA display CGI


Results 21 - 40 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
40549402 NC_004466.2 Pseudomonas aeruginosa phage PaP3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17604 + 15112 90 21.5 -23.8 NP_775240 5' arm      3' arm
17610 + 17708 88 21.5 -21.1 NP_775239 5' arm      3' arm
17642 - 17470 87 22 -20.7 NP_775239 5' arm      3' arm
17608 + 17311 90 23 -28.8 NP_775239 5' arm      3' arm
17609 + 17506 81 21.5 -24.4 NP_775239 5' arm      3' arm
17641 - 16567 90 19.5 -20.6 NP_775239 5' arm      3' arm
17606 + 16878 87 22 -20.6 NP_775239 5' arm      3' arm
17607 + 16980 83 19 -20.4 NP_775239 5' arm      3' arm
17611 + 19343 86 19 -21 NP_775239 5' arm      3' arm
17612 + 19958 88 19 -22.7 NP_775238 5' arm      3' arm
17643 - 21868 90 19.5 -31 NP_775233 5' arm      3' arm
17614 + 23276 89 21 -21.6 NP_775230 5' arm      3' arm
17644 - 23781 88 20 -26.1 NP_775230 5' arm      3' arm
17646 - 26401 90 19.5 -25.1 NP_775225 5' arm      3' arm
17647 - 26546 90 22 -22.7 NP_775225 5' arm      3' arm
17645 - 26220 90 21.5 -21.2 NP_775225 5' arm      3' arm
17615 + 27133 90 19.5 -22.9 NP_775225 5' arm      3' arm
17616 + 27435 86 23.5 -22.7 NP_775225 5' arm      3' arm
17648 - 27519 84 19.5 -23 NP_775225 5' arm      3' arm
17617 + 28033 90 22.5 -21.5 NP_775223 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.