miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17604	+	15112	90	21.5	-23.8	NP_775240		5' arm      3' arm
17609	+	17506	81	21.5	-24.4	NP_775239		5' arm      3' arm
17665	-	44598	89	21.5	-32	NP_775189		5' arm      3' arm
17638	-	9782	88	21.5	-24.6	NP_775248		5' arm      3' arm
17645	-	26220	90	21.5	-21.2	NP_775225		5' arm      3' arm
17610	+	17708	88	21.5	-21.1	NP_775239		5' arm      3' arm
17621	+	34135	89	21	-19.7	NP_775212		5' arm      3' arm
17625	+	38445	88	21	-19.6	NP_775208		5' arm      3' arm
17635	-	983	89	21	-27.3			5' arm      3' arm
17651	-	32824	90	21	-22.4	NP_775214		5' arm      3' arm
17589	+	984	85	21	-25.9			5' arm      3' arm
17634	+	44871	89	21	-27.6	NP_955001		5' arm      3' arm
17640	-	15883	90	21	-24.2	NP_775240		5' arm      3' arm
17655	-	35257	89	21	-24.7	NP_775211		5' arm      3' arm
17614	+	23276	89	21	-21.6	NP_775230		5' arm      3' arm
17657	-	38183	90	20.5	-19.9	NP_775208		5' arm      3' arm
17637	-	8639	88	20.5	-28.1	NP_775251		5' arm      3' arm
17652	-	33147	89	20.5	-27	NP_775214		5' arm      3' arm
17633	+	44514	81	20	-25.1			5' arm      3' arm
17662	-	43052	89	20	-29.6	NP_775195		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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