miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17662	-	43052	89	20	-29.6	NP_775195		5' arm      3' arm
17638	-	9782	88	21.5	-24.6	NP_775248		5' arm      3' arm
17648	-	27519	84	19.5	-23	NP_775225		5' arm      3' arm
17665	-	44598	89	21.5	-32	NP_775189		5' arm      3' arm
17642	-	17470	87	22	-20.7	NP_775239		5' arm      3' arm
17637	-	8639	88	20.5	-28.1	NP_775251		5' arm      3' arm
17639	-	15200	90	19.5	-23.2	NP_775240		5' arm      3' arm
17661	-	42737	90	22	-26.29	NP_955000		5' arm      3' arm
17660	-	41479	90	23.5	-19.5	NP_775201		5' arm      3' arm
17663	-	43246	89	19.5	-20.9	NP_775194		5' arm      3' arm
17651	-	32824	90	21	-22.4	NP_775214		5' arm      3' arm
17593	+	5010	88	24	-21	NP_775254		5' arm      3' arm
17617	+	28033	90	22.5	-21.5	NP_775223		5' arm      3' arm
17616	+	27435	86	23.5	-22.7	NP_775225		5' arm      3' arm
17615	+	27133	90	19.5	-22.9	NP_775225		5' arm      3' arm
17614	+	23276	89	21	-21.6	NP_775230		5' arm      3' arm
17612	+	19958	88	19	-22.7	NP_775238		5' arm      3' arm
17601	+	13627	89	22	-20.7	NP_775242		5' arm      3' arm
17600	+	11253	80	19	-24.4	NP_775245		5' arm      3' arm
17602	+	14134	90	25	-21.9	NP_775242		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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