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| GenBank Identifier | RefSeq Acc. | Name |
| 9628835 | NC_001720.1 | Fowl adenovirus A |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4374 | - | 26994 | 87 | 22.5 | -23.2 | NP_595044 | 5' arm 3' arm | ||
| 4387 | - | 40313 | 89 | 21.5 | -19.9 | NP_043904 | 5' arm 3' arm | ||
| 4388 | - | 40859 | 90 | 20 | -22.8 | NP_043904 | 5' arm 3' arm | ||
| 4385 | - | 37788 | 89 | 19.5 | -19.4 | NP_043901 | 5' arm 3' arm | ||
| 4351 | + | 37746 | 87 | 20 | -27.1 | NP_043901 | 5' arm 3' arm | ||
| 4349 | + | 30913 | 89 | 19 | -19.4 | NP_043892 | 5' arm 3' arm | ||
| 4383 | - | 30934 | 86 | 24.5 | -26.2 | NP_043892 | 5' arm 3' arm | ||
| 4382 | - | 30839 | 90 | 20.5 | -20.9 | NP_043892 | 5' arm 3' arm | ||
| 4381 | - | 29519 | 87 | 20.5 | -21.4 | NP_043891 | 5' arm 3' arm | ||
| 4377 | - | 28490 | 88 | 21.5 | -21.3 | NP_043891 | 5' arm 3' arm | ||
| 4348 | + | 29914 | 81 | 19 | -25 | NP_043891 | 5' arm 3' arm | ||
| 4378 | - | 28587 | 90 | 21.5 | -21.4 | NP_043891 | 5' arm 3' arm | ||
| 4380 | - | 28837 | 89 | 22.5 | -20.8 | NP_043891 | 5' arm 3' arm | ||
| 4379 | - | 28728 | 87 | 20.5 | -19.5 | NP_043891 | 5' arm 3' arm | ||
| 4372 | - | 25941 | 90 | 20.5 | -22.7 | NP_043889 | 5' arm 3' arm | ||
| 4371 | - | 25205 | 87 | 20 | -20.8 | NP_043889 | 5' arm 3' arm | ||
| 4370 | - | 25116 | 89 | 20 | -23.3 | NP_043889 | 5' arm 3' arm | ||
| 4369 | - | 24481 | 88 | 19.5 | -21.3 | NP_043889 | 5' arm 3' arm | ||
| 4347 | + | 24164 | 88 | 20.5 | -21.6 | NP_043889 | 5' arm 3' arm | ||
| 4368 | - | 24274 | 86 | 22.5 | -31.1 | NP_043889 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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