miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
4363	-	20053	88	20	-28.4	NP_043886		5' arm      3' arm
4370	-	25116	89	20	-23.3	NP_043889		5' arm      3' arm
4368	-	24274	86	22.5	-31.1	NP_043889		5' arm      3' arm
4356	-	9593	89	19.5	-21	NP_043878		5' arm      3' arm
4381	-	29519	87	20.5	-21.4	NP_043891		5' arm      3' arm
4359	-	17202	87	21.5	-30.2	NP_043884		5' arm      3' arm
4369	-	24481	88	19.5	-21.3	NP_043889		5' arm      3' arm
4377	-	28490	88	21.5	-21.3	NP_043891		5' arm      3' arm
4357	-	12313	89	21.5	-20.9	NP_043880		5' arm      3' arm
4365	-	20792	89	20	-32.4	NP_043886		5' arm      3' arm
4367	-	23436	87	21	-22.5			5' arm      3' arm
4372	-	25941	90	20.5	-22.7	NP_043889		5' arm      3' arm
4374	-	26994	87	22.5	-23.2	NP_595044		5' arm      3' arm
4371	-	25205	87	20	-20.8	NP_043889		5' arm      3' arm
4364	-	20197	89	21.5	-21.4	NP_043886		5' arm      3' arm
4333	+	11926	90	20.5	-20.3	NP_043879		5' arm      3' arm
4331	+	10401	90	22.5	-21.5	NP_043879		5' arm      3' arm
4347	+	24164	88	20.5	-21.6	NP_043889		5' arm      3' arm
4345	+	23031	89	22	-23.3	NP_043888		5' arm      3' arm
4342	+	21485	87	19	-19.7	NP_043887		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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