miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21933	+	55869	85	21.5	-21.9	NP_859233		5' arm      3' arm
21932	+	55470	86	19	-37.2	NP_859231		5' arm      3' arm
21931	+	55157	90	20	-20.8	NP_859230		5' arm      3' arm
21930	+	52679	87	19	-20.4	NP_859223		5' arm      3' arm
21929	+	50393	87	21.5	-25.5	NP_859219		5' arm      3' arm
21928	+	48149	89	21.5	-24.7	NP_859211		5' arm      3' arm
21927	+	45838	89	21.5	-26.6	NP_859206		5' arm      3' arm
21926	+	41751	87	21.5	-25.9	NP_859197		5' arm      3' arm
21925	+	41042	89	25.5	-27.4	NP_859195		5' arm      3' arm
21924	+	31350	90	24	-23.8			5' arm      3' arm
21923	+	28648	86	24	-29.8	NP_859151		5' arm      3' arm
21922	+	26602	89	28.5	-19.6	NP_859129		5' arm      3' arm
21921	+	26383	90	23.5	-28.2	NP_859146		5' arm      3' arm
21920	+	26185	86	20.5	-31.6	NP_859129		5' arm      3' arm
21919	+	22114	88	23	-24.5	NP_859138		5' arm      3' arm
21918	+	21271	88	19.5	-21.3	NP_859129		5' arm      3' arm
21917	+	21101	82	19	-20.8	NP_859134		5' arm      3' arm
21916	+	19994	82	20	-22	NP_859129		5' arm      3' arm
21915	+	19373	90	20.5	-20.4	NP_859129		5' arm      3' arm
21914	+	17594	84	23.5	-23.6	NP_859126		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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