miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21953	-	57806	90	20.5	-24.1	NP_859239		5' arm      3' arm
21952	-	54694	86	20	-26.3	NP_859224		5' arm      3' arm
21951	-	54365	89	19.5	-21.81	NP_859224		5' arm      3' arm
21950	-	52801	88	23	-23.11	NP_859223		5' arm      3' arm
21949	-	48036	88	21.5	-20	NP_859211		5' arm      3' arm
21948	-	46259	90	20	-20.5	NP_859206		5' arm      3' arm
21947	-	41129	87	23	-26.2	NP_859195		5' arm      3' arm
21946	-	39350	89	20	-22.9	NP_859189		5' arm      3' arm
21945	-	37708	88	19	-19.8	NP_859181		5' arm      3' arm
21944	-	36046	90	20	-21.1	NP_859173		5' arm      3' arm
21943	-	31708	89	23.5	-27.6			5' arm      3' arm
21942	-	25020	90	23	-19.6	NP_859129		5' arm      3' arm
21941	-	21702	87	21.5	-25	NP_859136		5' arm      3' arm
21940	-	21453	89	19	-20.52	NP_859136		5' arm      3' arm
21939	-	20458	88	23	-30.7	NP_859129		5' arm      3' arm
21938	-	11552	89	23.5	-29.31	NP_859109		5' arm      3' arm
21937	-	9143	88	19.5	-21	NP_859099		5' arm      3' arm
21936	-	8772	90	19	-21.5	NP_859099		5' arm      3' arm
21935	-	8485	90	21	-21	NP_859099		5' arm      3' arm
21934	+	56025	86	21.5	-24.9	NP_859235		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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