miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21972	+	26603	89	28.5	-19.6	NP_859312		5' arm      3' arm
21975	+	41042	89	25.5	-27.4	NP_859361		5' arm      3' arm
21979	+	49029	89	25	-28.1			5' arm      3' arm
21973	+	28648	86	24	-29.8	NP_859317		5' arm      3' arm
21974	+	31350	90	24	-23.8			5' arm      3' arm
22004	-	58431	89	23.5	-26.3	NP_859402		5' arm      3' arm
21971	+	26384	90	23.5	-28.2	NP_859312		5' arm      3' arm
21964	+	17595	84	23.5	-23.6	NP_859292		5' arm      3' arm
21990	-	11553	89	23.5	-29.31	NP_859275		5' arm      3' arm
21995	-	31708	89	23.5	-27.6			5' arm      3' arm
21955	+	4249	88	23	-24	NP_859251		5' arm      3' arm
21956	+	6798	89	23	-24.2	NP_859260		5' arm      3' arm
21999	-	41129	87	23	-26.2	NP_859361		5' arm      3' arm
21954	+	3425	89	23	-29.7			5' arm      3' arm
21991	-	20459	88	23	-30.7	NP_859299		5' arm      3' arm
21969	+	22115	88	23	-24.5	NP_859295		5' arm      3' arm
21994	-	25021	90	23	-19.6	NP_859295		5' arm      3' arm
21957	+	7416	89	22.5	-22.3	NP_859262		5' arm      3' arm
21980	+	51638	87	22.5	-27.1	NP_859387		5' arm      3' arm
21958	+	8147	87	22	-26	NP_859265		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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