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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18008 | - | 8829 | 88 | 21 | -23.2 | NP_813758 | 5' arm 3' arm | ||
| 17985 | + | 22311 | 88 | 19.5 | -23.2 | NP_813776 | 5' arm 3' arm | ||
| 17967 | + | 3047 | 90 | 21 | -23.3 | NP_813747 | 5' arm 3' arm | ||
| 18026 | - | 29171 | 87 | 19 | -23.4 | NP_813780 | 5' arm 3' arm | ||
| 18012 | - | 13688 | 85 | 19 | -23.4 | NP_813764 | 5' arm 3' arm | ||
| 17981 | + | 17964 | 90 | 22.5 | -23.5 | NP_813772 | 5' arm 3' arm | ||
| 18000 | - | 3238 | 87 | 19 | -23.69 | NP_813747 | 5' arm 3' arm | ||
| 18015 | - | 19805 | 88 | 20 | -23.8 | NP_813773 | 5' arm 3' arm | ||
| 17978 | + | 13670 | 88 | 19 | -23.8 | NP_813764 | 5' arm 3' arm | ||
| 18018 | - | 21237 | 89 | 20.5 | -24.2 | NP_813775 | 5' arm 3' arm | ||
| 17980 | + | 17059 | 89 | 20.5 | -24.5 | NP_813771 | 5' arm 3' arm | ||
| 18003 | - | 4490 | 90 | 21 | -24.6 | NP_813750 | 5' arm 3' arm | ||
| 17972 | + | 6023 | 90 | 20.5 | -24.6 | NP_813753 | 5' arm 3' arm | ||
| 17998 | - | 2570 | 85 | 24.5 | -24.6 | NP_813747 | 5' arm 3' arm | ||
| 18023 | - | 25111 | 88 | 23 | -24.9 | NP_813778 | 5' arm 3' arm | ||
| 18002 | - | 3967 | 78 | 21 | -25.02 | NP_813749 | 5' arm 3' arm | ||
| 17966 | + | 1830 | 89 | 21 | -25.1 | NP_813747 | 5' arm 3' arm | ||
| 17988 | + | 28537 | 90 | 21.5 | -25.2 | NP_813780 | 5' arm 3' arm | ||
| 17969 | + | 4387 | 86 | 19.5 | -25.3 | NP_813750 | 5' arm 3' arm | ||
| 18031 | - | 35195 | 89 | 19.5 | -25.8 | NP_813786 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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