miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18002	-	3967	78	21	-25.02	NP_813749		5' arm      3' arm
18030	-	34639	83	21	-20.7	NP_813785		5' arm      3' arm
17991	+	33727	88	21.5	-20.5	NP_813782		5' arm      3' arm
17988	+	28537	90	21.5	-25.2	NP_813780		5' arm      3' arm
17987	+	25824	89	21.5	-22.2	NP_813779		5' arm      3' arm
17982	+	18200	89	21.5	-20.9	NP_813772		5' arm      3' arm
18006	-	7240	88	21.5	-21.1	NP_813755		5' arm      3' arm
18013	-	15964	88	21.5	-20.5	NP_813767		5' arm      3' arm
17965	+	445	89	22	-26.1			5' arm      3' arm
17993	+	37200	89	22	-22.3			5' arm      3' arm
17963	+	57	89	22	-22.3			5' arm      3' arm
17968	+	3525	90	22.5	-22	NP_813747		5' arm      3' arm
17996	-	2058	85	22.5	-20	NP_813747		5' arm      3' arm
17977	+	12667	90	22.5	-21.4	NP_813764		5' arm      3' arm
17981	+	17964	90	22.5	-23.5	NP_813772		5' arm      3' arm
17994	-	528	82	22.5	-26.4			5' arm      3' arm
18028	-	32831	85	22.5	-21.6	NP_813781		5' arm      3' arm
17973	+	6463	89	23	-27.1	NP_813752		5' arm      3' arm
18021	-	23071	87	23	-22.2	NP_813776		5' arm      3' arm
18022	-	24108	84	23	-22.5	NP_813776		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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