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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18015 | - | 19805 | 88 | 20 | -23.8 | NP_813773 | 5' arm 3' arm | ||
| 18024 | - | 27659 | 88 | 20 | -22.4 | NP_813780 | 5' arm 3' arm | ||
| 18014 | - | 19658 | 85 | 20.5 | -19.8 | NP_813773 | 5' arm 3' arm | ||
| 18016 | - | 20700 | 90 | 20.5 | -21.9 | NP_813774 | 5' arm 3' arm | ||
| 18029 | - | 34499 | 90 | 20.5 | -20.2 | NP_813785 | 5' arm 3' arm | ||
| 18018 | - | 21237 | 89 | 20.5 | -24.2 | NP_813775 | 5' arm 3' arm | ||
| 18020 | - | 22305 | 89 | 20.5 | -22.3 | NP_813776 | 5' arm 3' arm | ||
| 17980 | + | 17059 | 89 | 20.5 | -24.5 | NP_813771 | 5' arm 3' arm | ||
| 17972 | + | 6023 | 90 | 20.5 | -24.6 | NP_813753 | 5' arm 3' arm | ||
| 17990 | + | 31393 | 90 | 21 | -19.6 | NP_813780 | 5' arm 3' arm | ||
| 18003 | - | 4490 | 90 | 21 | -24.6 | NP_813750 | 5' arm 3' arm | ||
| 18008 | - | 8829 | 88 | 21 | -23.2 | NP_813758 | 5' arm 3' arm | ||
| 17992 | + | 36989 | 89 | 21 | -27.7 | 5' arm 3' arm | |||
| 17986 | + | 25095 | 87 | 21 | -22.3 | NP_813778 | 5' arm 3' arm | ||
| 18002 | - | 3967 | 78 | 21 | -25.02 | NP_813749 | 5' arm 3' arm | ||
| 17970 | + | 4952 | 89 | 21 | -27 | NP_813751 | 5' arm 3' arm | ||
| 17967 | + | 3047 | 90 | 21 | -23.3 | NP_813747 | 5' arm 3' arm | ||
| 18017 | - | 21064 | 90 | 21 | -20.3 | NP_813774 | 5' arm 3' arm | ||
| 17966 | + | 1830 | 89 | 21 | -25.1 | NP_813747 | 5' arm 3' arm | ||
| 17971 | + | 5199 | 90 | 21 | -21 | NP_813751 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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