miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18018	-	21237	89	20.5	-24.2	NP_813775		5' arm      3' arm
18015	-	19805	88	20	-23.8	NP_813773		5' arm      3' arm
17978	+	13670	88	19	-23.8	NP_813764		5' arm      3' arm
18000	-	3238	87	19	-23.69	NP_813747		5' arm      3' arm
17981	+	17964	90	22.5	-23.5	NP_813772		5' arm      3' arm
18026	-	29171	87	19	-23.4	NP_813780		5' arm      3' arm
18012	-	13688	85	19	-23.4	NP_813764		5' arm      3' arm
17967	+	3047	90	21	-23.3	NP_813747		5' arm      3' arm
17985	+	22311	88	19.5	-23.2	NP_813776		5' arm      3' arm
18008	-	8829	88	21	-23.2	NP_813758		5' arm      3' arm
17989	+	30055	90	19	-22.9	NP_813780		5' arm      3' arm
18022	-	24108	84	23	-22.5	NP_813776		5' arm      3' arm
18024	-	27659	88	20	-22.4	NP_813780		5' arm      3' arm
17999	-	2913	88	20	-22.4	NP_813747		5' arm      3' arm
17993	+	37200	89	22	-22.3			5' arm      3' arm
18020	-	22305	89	20.5	-22.3	NP_813776		5' arm      3' arm
17986	+	25095	87	21	-22.3	NP_813778		5' arm      3' arm
18004	-	4592	83	23.5	-22.3	NP_813751		5' arm      3' arm
17979	+	14880	88	19	-22.3	NP_813766		5' arm      3' arm
17963	+	57	89	22	-22.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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