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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 17974 | + | 8954 | 90 | 25.5 | -21.5 | NP_813759 | 5' arm 3' arm | ||
| 18028 | - | 32831 | 85 | 22.5 | -21.6 | NP_813781 | 5' arm 3' arm | ||
| 17983 | + | 18788 | 85 | 19.5 | -21.6 | NP_813772 | 5' arm 3' arm | ||
| 18027 | - | 30813 | 90 | 23 | -21.7 | NP_813780 | 5' arm 3' arm | ||
| 18025 | - | 29005 | 88 | 19.5 | -21.9 | NP_813780 | 5' arm 3' arm | ||
| 18016 | - | 20700 | 90 | 20.5 | -21.9 | NP_813774 | 5' arm 3' arm | ||
| 18010 | - | 11701 | 90 | 19 | -21.9 | NP_813762 | 5' arm 3' arm | ||
| 17968 | + | 3525 | 90 | 22.5 | -22 | NP_813747 | 5' arm 3' arm | ||
| 17987 | + | 25824 | 89 | 21.5 | -22.2 | NP_813779 | 5' arm 3' arm | ||
| 18021 | - | 23071 | 87 | 23 | -22.2 | NP_813776 | 5' arm 3' arm | ||
| 17963 | + | 57 | 89 | 22 | -22.3 | 5' arm 3' arm | |||
| 17993 | + | 37200 | 89 | 22 | -22.3 | 5' arm 3' arm | |||
| 17979 | + | 14880 | 88 | 19 | -22.3 | NP_813766 | 5' arm 3' arm | ||
| 18004 | - | 4592 | 83 | 23.5 | -22.3 | NP_813751 | 5' arm 3' arm | ||
| 17986 | + | 25095 | 87 | 21 | -22.3 | NP_813778 | 5' arm 3' arm | ||
| 18020 | - | 22305 | 89 | 20.5 | -22.3 | NP_813776 | 5' arm 3' arm | ||
| 17999 | - | 2913 | 88 | 20 | -22.4 | NP_813747 | 5' arm 3' arm | ||
| 18024 | - | 27659 | 88 | 20 | -22.4 | NP_813780 | 5' arm 3' arm | ||
| 18022 | - | 24108 | 84 | 23 | -22.5 | NP_813776 | 5' arm 3' arm | ||
| 17989 | + | 30055 | 90 | 19 | -22.9 | NP_813780 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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