miRNA display CGI


Results 21 - 40 of 70 are showing below:
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GenBank Identifier RefSeq Acc. Name
29366701 NC_004665.1 Pseudomonas phage gh-1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17966 + 1830 89 21 -25.1 NP_813747 5' arm      3' arm
17967 + 3047 90 21 -23.3 NP_813747 5' arm      3' arm
17969 + 4387 86 19.5 -25.3 NP_813750 5' arm      3' arm
17974 + 8954 90 25.5 -21.5 NP_813759 5' arm      3' arm
17973 + 6463 89 23 -27.1 NP_813752 5' arm      3' arm
17970 + 4952 89 21 -27 NP_813751 5' arm      3' arm
17971 + 5199 90 21 -21 NP_813751 5' arm      3' arm
17972 + 6023 90 20.5 -24.6 NP_813753 5' arm      3' arm
17977 + 12667 90 22.5 -21.4 NP_813764 5' arm      3' arm
17978 + 13670 88 19 -23.8 NP_813764 5' arm      3' arm
17975 + 9312 86 25 -28.7 NP_813759 5' arm      3' arm
17994 - 528 82 22.5 -26.4 5' arm      3' arm
18023 - 25111 88 23 -24.9 NP_813778 5' arm      3' arm
18026 - 29171 87 19 -23.4 NP_813780 5' arm      3' arm
18025 - 29005 88 19.5 -21.9 NP_813780 5' arm      3' arm
18027 - 30813 90 23 -21.7 NP_813780 5' arm      3' arm
18031 - 35195 89 19.5 -25.8 NP_813786 5' arm      3' arm
18029 - 34499 90 20.5 -20.2 NP_813785 5' arm      3' arm
18030 - 34639 83 21 -20.7 NP_813785 5' arm      3' arm
18028 - 32831 85 22.5 -21.6 NP_813781 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.